BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C07SP1|AL425666
(751 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1424 1393 0.0
>3x_Contig1424
Length = 9842
Score = 1393 bits (697), Expect = 0.0
Identities = 735/751 (97%), Gaps = 2/751 (0%)
Strand = Plus / Plus
Query: 1 aacaccccgccaaattgttgattgawgtcgccatttgaggtattatgatagttattatga 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1550 aacaccccgccaaattgttgattgaagtcgccatttgaggtattatgatagttattatga 1609
Query: 61 tttycagcatttaaaaaagaatattcatcccgatcaatggcctgccatgaatctgtgaga 120
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1610 tttccagcatttaaaaaagaatattcatcccgatcaatggcctgccatgaatctgtgag- 1668
Query: 121 ttctttactatgagtgtgagttttaatatcattatgatcaatattgttacttttaccctt 180
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1669 tcctttactatgagtgtgagtattaatatcattatgatcaatattgttacttttaccctt 1728
Query: 181 cctatcgattaaatcttgattttggatcagcctggaatcgaatgcacagctttgctgtyc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1729 cctatcgattaaatcttgattttggatcagcctggaatcgaatgcacagctttgctgtcc 1788
Query: 241 gttcaataaatccataactgagttatgtggatcgagaatrctgtgtcgctgagcactact 300
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1789 gttcaataaatccataactgagtcatgtggatcgagaatactgtgtcgctgagcactact 1848
Query: 301 ggcactaacaccgctgccgctgcttccagcatctagtgaatataactgacgattattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1849 ggcactaacaccgctgccgctgcttccagcatctagtgaatataactgacgattattgtt 1908
Query: 361 accaggaggtgcaccccagayccctttagacccagacatctgttaacagaaaaaaatagt 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1909 accaggaggtgcaccccagacccctttagacccagacatctgttaacagaaaaaaatagt 1968
Query: 421 aaaatattcaactgaccctttgtagtgacaatacgacaaamactagcaaacccctttata 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1969 aaaatattcaactgaccctttgtagtgacaatacgacaaacactagcaaacccctttata 2028
Query: 481 aatgagttcttagctcactctaagacttcgcgaaaaggagaagaatagagtccgaataaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 aatgagttcttagctcactctaagacttcgcgaaaaggagaagaatagagtccgaataaa 2088
Query: 541 aatcaaagattatsagttaatcagagacaagagttatggctgtgaactatacctcttcaa 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2089 aatcaaagattatcagttaatcagagacaagagttatggctgtgaactatacctcttcaa 2148
Query: 601 aagatccaaatwgagttatcataggaggaataaacccttaagagctttgtaatattwata 660
|||| |||||| |||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 2149 aagacccaaatagagtaatca-aggaggaataaacccttaagagctttgtaatattaata 2207
Query: 661 aatcaatatcagcgtacctttaagtaatgtaacaaaaagaaatttgaatacaaatcagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2208 aatcaatatcagcgtacctttaagtaatgtaacaaaaagaaatttgaatacaaatcagag 2267
Query: 721 ggacaaaagactggtttaaggtacaacaaac 751
|||||||||||||||||||||||||||||||
Sbjct: 2268 ggacaaaagactggtttaaggtacaacaaac 2298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5304
Number of Sequences: 1807
Number of extensions: 5304
Number of successful extensions: 123
Number of sequences better than 1.0e-20: 1
length of query: 751
length of database: 10,358,551
effective HSP length: 16
effective length of query: 735
effective length of database: 10,329,639
effective search space: 7592284665
effective search space used: 7592284665
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)